From d7e10fed0af5ee03a8d8e86a4b5e5dc4e76ea068 Mon Sep 17 00:00:00 2001 From: Dimitri Yatsenko Date: Mon, 20 Jul 2026 17:27:15 -0500 Subject: [PATCH] docs(readme): fix stale citation and add PostgreSQL as a peer backend MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit - Citation pointed at a non-existent arXiv id (2303.00102/2023); replace with the current canonical DataJoint 2.0 manuscript (arXiv:2602.16585, 2026) per about/citation.md, incl. RRID. - README listed only MySQL; the compose stack now runs PostgreSQL (postgres:15, MODE=EXECUTE_PG) and PostgreSQL is a peer backend — note it in the Docker environment and native prerequisites. --- README.md | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/README.md b/README.md index a8cb0a0c..d664adb5 100644 --- a/README.md +++ b/README.md @@ -38,11 +38,11 @@ MODE="LIVE" docker compose up --build # MODE="BUILD" docker compose up --build ``` -The Docker environment includes MySQL, MinIO, and all dependencies. +The Docker environment includes MySQL, PostgreSQL, MinIO, and all dependencies. ### Native Python -**Prerequisites:** Python 3.10+, MySQL 8.0+ +**Prerequisites:** Python 3.10+, and a supported backend — MySQL 8.0+ or PostgreSQL (peer backends) ```bash # Setup @@ -104,7 +104,7 @@ python scripts/check_notebook_versions.py ## Citation -> Yatsenko D, Walker EY, Tolias AS. DataJoint: A Simpler Relational Data Model. arXiv:2303.00102. 2023. doi: [10.48550/arXiv.2303.00102](https://doi.org/10.48550/arXiv.2303.00102) +> Yatsenko D, Nguyen TT. DataJoint 2.0: A Computational Substrate for Agentic Scientific Workflows. arXiv:2602.16585. 2026. doi: [10.48550/arXiv.2602.16585](https://doi.org/10.48550/arXiv.2602.16585) — [RRID:SCR_014543](https://scicrunch.org/resolver/SCR_014543) Full citation information: [docs.datajoint.com/about/citation/](https://docs.datajoint.com/about/citation/)