Skip to content
@CDCgov

Centers for Disease Control and Prevention

CDC's collaborative software projects to protect America from health, safety, and security threats, both foreign and in the U.S. No PII or PHI permitted
README.md

CDCGov Organization

This is CDC's GitHub organization for collaborating on open source projects. More information on CDC's open collaboration projects is available at openCDC.

Check out our Open Source Practices and please suggest any ideas for improvement by sending a pull request.

Check out a portal of all the projects hosted in the CDCGov domain.

If you would like to create a new project, please fill out an issue on https://github.com/cdcgov/template logging in with your CDC credentials.

If you would like to join the CDCGov organization, or would like to suggest some others to join, please drop an issue into the template repo.

No PII/PHI permitted for hosting in this environment.

Pinned Loading

  1. cdcgov.github.io cdcgov.github.io Public

    Portal site for all CDCgov projects, https://cdcgov.github.io

    HTML 25 35

  2. template template Public template

    Template repository with rules, practices, and privacy, license, records notices to help people use the CDCgov GitHub organization.

    41 50

Repositories

Showing 10 of 571 repositories
  • dibbs-ecr-refiner Public

    The DIBBs eCR Refiner reduces eICR and RR files down to only the most useful, necessary information to alleviate performance and storage burden on eCR data pipelines and disease surveillance systems and bring focus to pertinent data for a given reportable condition.

    CDCgov/dibbs-ecr-refiner's past year of commit activity
    XSLT 6 Apache-2.0 5 69 4 Updated Sep 16, 2026
  • cfa-cloudops Public
    CDCgov/cfa-cloudops's past year of commit activity
    Python 2 Apache-2.0 1 21 3 Updated Sep 16, 2026
  • cfa-stf-routine-forecasting Public

    Models and infrastructure for routine forecasting of respiratory disease burden

    CDCgov/cfa-stf-routine-forecasting's past year of commit activity
    Python 16 Apache-2.0 4 30 2 Updated Sep 16, 2026
  • covid19-forecast-hub Public

    A repository run by the Centers for Disease Control and Prevention (CDC) to collect forecasts of incident respiratory COVID-19 hospital admissions and emergency department visits.

    CDCgov/covid19-forecast-hub's past year of commit activity
    28 Apache-2.0 40 10 4 Updated Sep 16, 2026
  • zoe Public

    Zoe provides both broad and highly specialized implementations for bioinformatics. In particular, we focus on common data formats and methods relevant for the sequencing of RNA viruses.

    CDCgov/zoe's past year of commit activity
    Rust 8 Apache-2.0 3 0 0 Updated Sep 16, 2026
  • cfa-dataops Public
    CDCgov/cfa-dataops's past year of commit activity
    Python 5 Apache-2.0 1 8 1 Updated Sep 16, 2026
  • polkapox Public
    CDCgov/polkapox's past year of commit activity
    Python 12 Apache-2.0 8 14 5 Updated Sep 16, 2026
  • mira-oxide Public
    CDCgov/mira-oxide's past year of commit activity
    Rust 5 Apache-2.0 1 2 3 Updated Sep 16, 2026
  • Mira-nf Public
    CDCgov/Mira-nf's past year of commit activity
    Nextflow 22 MIT 8 3 0 Updated Sep 16, 2026
  • Mira Public

    MIRA: Portable, Interactive Application for High-Quality Influenza, SARS-CoV-2 and RSV Genome Assembly, Annotation, and Curation

    CDCgov/Mira's past year of commit activity
    Python 25 6 1 7 Updated Sep 16, 2026
View all repositories

Top languages

Loading…

Most used topics

Loading…