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17 changes: 17 additions & 0 deletions docs/mesh-doctor.rst
Original file line number Diff line number Diff line change
Expand Up @@ -125,6 +125,23 @@ The ``generateFractures`` module will split the mesh and generate the multi-bloc
.. command-output:: mesh-doctor generateFractures --help
:shell:

``cureOneSided``
""""""""""""""""

Node splitting (``generateFractures``) duplicates the fault nodes so that both sides can move independently,
but it writes a single surface polygon per fault location, remapped onto whichever 3D neighbour it enumerated first.
The fault surface is then a patchwork: adjacent faces sit on different collocated node copies.
Since ``geos`` derives the seal node set from that surface, the open matrix/fracture taps end up on mixed sides
and fluid crosses the fault even though most faces look sealed.

The ``cureOneSided`` module rewrites every tagged fault face onto the coincident real 3D-cell face of one
consistent side per fault value. Two cell arrays are added for display and QC:
``faultSide`` (``+1`` reference side, ``-1`` residual degeneracy, ``0`` non-fault)
and ``onHole`` (``1`` on faces bordering a residual hole). A fully cured fault has ``onHole`` all ``0``.

.. command-output:: mesh-doctor cureOneSided --help
:shell:

``generateGlobalIds``
"""""""""""""""""""""

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