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@Molmed

Uppsala University, Department of Medical Sciences, Molecular Precision Medicine

Molecular Precision Medicine research group and the SNP&SEQ Technology Platform

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  1. irma-scripts irma-scripts Public

    Stand-alone scripts deployed to Irma

    Python 1 8

Repositories

Showing 10 of 70 repositories
  • mlomix Public

    This pipeline preprocesses gene expression and DNA methylation data for machine learning.

    Molmed/mlomix's past year of commit activity
    Nextflow 0 MIT 0 0 0 Updated Sep 24, 2026
  • clarity-ext Public

    Extensions for Clarity

    Molmed/clarity-ext's past year of commit activity
    Python 6 8 0 2 Updated Sep 18, 2026
  • genologics Public Forked from SciLifeLab/genologics

    Python interface to the GenoLogics LIMS server via its REST API.

    Molmed/genologics's past year of commit activity
    Python 0 MIT 53 0 3 Updated Sep 18, 2026
  • checkQC Public

    CheckQC inspects the content of an Illumina runfolder and determines if it passes a set of quality criteria

    Molmed/checkQC's past year of commit activity
    Python 30 GPL-3.0 17 10 (2 issues need help) 0 Updated Sep 17, 2026
  • pallas_portal Public

    The web application for the PALLAS classifier.

    Molmed/pallas_portal's past year of commit activity
    Python 0 0 0 0 Updated Sep 15, 2026
  • conformist Public

    A conformal prediction framework implementing conformal risk control, providing statistically guaranteed prediction sets for any classifier.

    Molmed/conformist's past year of commit activity
    Python 3 MIT 0 1 0 Updated Sep 2, 2026
  • irma-scripts Public

    Stand-alone scripts deployed to Irma

    Molmed/irma-scripts's past year of commit activity
    Python 1 8 0 1 Updated Aug 11, 2026
  • Equine_cfRNA Public

    Cell free RNA Transcript Analysis Script for Equine Asthma at the Molecular Precision Medicine research group, Uppsala University.

    Molmed/Equine_cfRNA's past year of commit activity
    R 0 0 0 0 Updated Aug 5, 2026
  • ngs2counts_nextflow Public

    A Nextflow pipeline to trigger ngs2counts on olink runfolders.

    Molmed/ngs2counts_nextflow's past year of commit activity
    Nextflow 0 MIT 2 0 0 Updated Jul 8, 2026
  • st2-docker Public Forked from matrulda/st2-docker

    StackStorm docker-compose deployment

    Molmed/st2-docker's past year of commit activity
    Shell 0 Apache-2.0 165 0 1 Updated Jun 26, 2026
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