Slavov Laboratory
- 47 followers
- Boston, MA
- https://slavovlab.net
- @slavovlab
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Repositories
- decode Public
Computational pipeline for quantifying amino acid substitutions from alternate RNA decoding
- EMT_TGFB_2023 Public
Dynamics of single-cell protein covariation during EMT. Analysis of TGF-B induced EMT in MCF10A cells using nPoP and SCoPE2.
- DO-MS Public
An modular and extensible app for visualization of mass spectrometry data and optimization of data acquisition.
- Single-nucleus-proteomics Public
Single-nucleus proteomics identifies regulators of protein transport
- sc_metabolic_pulse Public
Analysis of protein synthesis and degradation in single cell cells based on in vivo metabolic pulse with stable heavy isotopes
- early-stage-embryos Public
Here you will find scripts and related files that are behind analyses presented in "Proteome asymmetry in mouse & human embryos before fate specification"".
- QuantQC Public
QuantQC is a package for quality control (QC) of single-cell proteomics data. It is optimized to work with nPOP, a method for massively parallel sample preparation on glass slides.
- Protein-Clearance Public
Analysis from Leduc and Slavov (2025): Protein degradation and growth dependent dilution substantially shape mammalian proteomes
- SCoPE2 Public
- plexDIA Public
Multiplexed data-independent acquisition (plexDIA) for increasing proteomics throughput. The code is distributed by an MIT license.
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