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Update dependencies: pandas>=3 and python>=3.11#4691

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SpikeInterface:mainfrom
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Update dependencies: pandas>=3 and python>=3.11#4691
alejoe91 wants to merge 5 commits into
SpikeInterface:mainfrom
alejoe91:pandas-3

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@alejoe91

@alejoe91 alejoe91 commented Jul 14, 2026

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Fixes #4687

@alejoe91 alejoe91 added this to the 0.105.0 milestone Jul 15, 2026
@alejoe91 alejoe91 requested review from chrishalcrow and h-mayorquin and removed request for chrishalcrow July 15, 2026 17:00

@h-mayorquin h-mayorquin left a comment

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LGTM

It is is a breaking change or users who for some reason can't use the older pandas but I guess they have older versions of SpikeInterface for that,

@chrishalcrow

chrishalcrow commented Jul 15, 2026

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I'm not sure that dropping 3.10 support is worth it to support pandas 3 - I think we should at least discuss it. This would leave us only supporting three versions of Python.

(I'm ok with the PR from a technical standpoint though!)

@zm711

zm711 commented Jul 15, 2026

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I agree with Chris. 3.10 isn't EOL until October so removing support before then at least seems premature to me.

@alejoe91

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I agree with Chris. 3.10 isn't EOL until October so removing support before then at least seems premature to me.

Both pandas 3 and zarr 3 dropped support for 3.10. I don't think this will be an issue. Hopefully zarr v3 will be in main by then too

@alejoe91

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LGTM

It is is a breaking change or users who for some reason can't use the older pandas but I guess they have older versions of SpikeInterface for that,

And I agree with @h-mayorquin here too. If someone wants to use 3.10, we have plenty of older versions (including the current one) with support :)

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read_phy / PhySortingExtractor raises "assignment destination is read-only" under pandas >= 3.0

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