Team MacLean Bioinformatics
Bioinformatics software, analysis and DevOps projects from Team MacLean
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- United Kingdom
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Showing 10 of 206 repositories
- komondor-api Public
- komondor-web Public
- images.tsl.ac.uk Public
- proThrow Public
- SynBioShop Public
- software_projects Public
Lists of repos that are software projects, R packages, and generally tools rather than analysis results
- metrics-petri Public Forked from rotsl/metrics-petri
Python package repository for quantifying Magnaporthe oryzae colony growth, morphology, cracking, and texture from time-series Petri-dish images.
- Automator Public Forked from rotsl/Automator
Research automation system for imaging microbial plates [Magnaporthe Orzae]
- RR_BINF_2101_fungal_coverage_in_petri_dishes Public Forked from rotsl/petrimodel
This repository trains and evaluates an area-consistency small U-Net for Petri image segmentation, then supports manual diameter validation against model-generated masks. It includes training data, LabelMe JSON annotations, trained checkpoints, sweep plots, and a PySide6 desktop tool for reviewing diameter measurements.
- gbeta Public
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